<?xml version='1.0' encoding='UTF-8'?>
<results country_code='en' xmlns:collection='/collection.xml' xmlns='/lsdb_tree.xml'>
  <category name='MEDALS Catalog' node_url='http://cs14.dbcls.jp:1978/node/medals' id='medals'>
    <database title='H-InvDB' url='http://www.jbirc.jbic.or.jp/hinv/ahg-db/index.jsp' update_rate='6' id='9' mdate='2012/04/20' alias_name='H-Invitational database'>
      <collection:specification data_type='DNA' data_volume='3160.848' spec_class='DB'>
        <collection:id_type id='HIX (gene cluster)'/>
        <collection:id_type id='HIT (transcript)'/>
        <collection:id_type id='HIP (protein)'/>
        <collection:id_type id='HIF (gene family/group)'/>
        <collection:related_id_type id='CHGC (http://www.chgc.sh.cn/en/)'/>
        <collection:related_id_type id='DKFZ/MIPS (http://www.dkfz.de/)'/>
        <collection:related_id_type id='IMSUT (http://www.ims.u-tokyo.ac.jp/imsut/en/)'/>
        <collection:related_id_type id='KDRI (http://www.kazusa.or.jp/e/)'/>
        <collection:related_id_type id='MGC/NCI (http://mgc.nci.nih.gov/)'/>
        <collection:related_id_type id='BIND (http://bond.unleashedinformatics.com/)'/>
        <collection:related_id_type id='BodyMap (http://bodymap.ims.u-tokyo.ac.jp/)'/>
        <collection:related_id_type id='CCDS (http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi?REQUEST=CCDS&amp;DATA=CCDS4091)'/>
        <collection:related_id_type id='dbSNP (http://www.ncbi.nlm.nih.gov/SNP/snp_ref.cgi?searchType=adhoc_search&amp;type=rs&amp;rs=rs35752268)'/>
        <collection:related_id_type id='DDBJ (http://getentry.ddbj.nig.ac.jp/search/get_entry?accnumber=BC053657)'/>
        <collection:related_id_type id='DIP (http://dip.doe-mbi.ucla.edu)'/>
        <collection:related_id_type id='Ensembl (http://uswest.ensembl.org/Homo_sapiens/Transcript/Summary?g=ENSG00000113532;r=5:100145357-100238970;t=ENST00000231461)'/>
        <collection:related_id_type id='EntrezGene (http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&amp;cmd=Retrieve&amp;dopt=Graphics&amp;list_uids=7903)'/>
        <collection:related_id_type id='fRNAdb (http://www.ncrna.org/frnadb/detail.html?i_name=FR075942)'/>
        <collection:related_id_type id='GenAtlas'/>
        <collection:related_id_type id='Gene ontology (GO) (http://www.ebi.ac.uk/QuickGO/GTerm?id=GO:0008373)'/>
        <collection:related_id_type id='GeneCards (http://www.genecards.org/cgi-bin/carddisp.pl?gene=ST8SIA4)'/>
        <collection:related_id_type id='GGDB (http://riodb.ibase.aist.go.jp/rcmg/ggdb/Homolog?cat=symbol&amp;symbol=ST8SIA4)'/>
        <collection:related_id_type id='GTOP (http://sybock.genes.nig.ac.jp/~hinv7/cgi-bin/mas.pl.cgi?org=hinv7&amp;id=HIT000044689)'/>
        <collection:related_id_type id='HGNC (http://www.genenames.org/data/hgnc_data.php?match=ST8SIA4)'/>
        <collection:related_id_type id='H-GOLD (GDBS) (http://hinv.jp/gdbs/viewer/Viewer?ch=5&amp;fr=100145359&amp;to=100238970&amp;gv=new&amp;md=1)'/>
        <collection:related_id_type id='HGPD (http://riodb.ibase.aist.go.jp/hgpd/cgi-bin/pg_locus_list.cgi?txt_srch_cdna_name=FLJ82330)'/>
        <collection:related_id_type id='HPRD (http://www.hprd.org/)'/>
        <collection:related_id_type id='IntAct (http://www.ebi.ac.uk/intact/main.xhtml)'/>
        <collection:related_id_type id='InterPro (http://www.ebi.ac.uk/interpro/IEntry?ac=IPR012163)'/>
        <collection:related_id_type id='KEGG (http://www.genome.jp/dbget-bin/www_bget?hsa+7903)'/>
        <collection:related_id_type id='LIFEdb (http://www.lifedb.de/lifedb/)'/>
        <collection:related_id_type id='MGI (http://www.informatics.jax.org/searchtool/Search.do?query=mgi:106018)'/>
        <collection:related_id_type id='MINT (http://mint.bio.uniroma2.it/mint/Welcome.do)'/>
        <collection:related_id_type id='Mutation view (http://mutview.dmb.med.keio.ac.jp/MutationView/jsp/mutview/java/geneWin.jsp?omimId=?602859)'/>
        <collection:related_id_type id='NC-IUBMB (EC)'/>
        <collection:related_id_type id='OMIM (http://omim.org/entry/601888)'/>
        <collection:related_id_type id='PubMed (http://www.ncbi.nlm.nih.gov/pubmed/7624364?dopt=Abstract)'/>
        <collection:related_id_type id='RefSeq (http://www.ncbi.nlm.nih.gov/nucleotide/NM_175052)'/>
        <collection:related_id_type id='UCSC (http://genome.ucsc.edu/cgi-bin/hgTracks?org=Human&amp;position=chr5:100142639-100238987&amp;db=)'/>
        <collection:related_id_type id='UniGene (http://www.ncbi.nlm.nih.gov/sites/entrez?db=unigene)'/>
        <collection:related_id_type id='UniProt (http://www.uniprot.org/uniprot/Q92187)'/>
        <collection:mol_type primary='yes' type='RNA'/>
        <collection:mol_type type='human'/>
        <collection:mol_type type='full-length'/>
        <collection:mol_type type='cDNA'/>
        <collection:mol_type/>
        <collection:mol_type type='mRNA'/>
        <collection:interface type='GUI'/>
        <collection:interface type='FTP'/>
        <collection:interface type='SOAP web service'/>
        <collection:interface type='REST web service'/>
      </collection:specification>
      <collection:medals id='9' list_url='http://www.medals.jp/elist/detail/9' site_image='http://medals.jp/images/thumnail/H-InvDB.ja.jpg'/>
      <collection:input_example>Enter the keyword “protein” in the text box on the upper right of the top page and click “GO” button. </collection:input_example>
      <collection:method_download>Download from the following sites FTP:ftp://ftp.ddbj.nig.ac.jp/mirror_database/hinv/ or HTTP:http://www.h-invitational.jp/hinv/dataset/download_jp.cgi</collection:method_download>
      <collection:resource name='CHGC'/>
      <collection:resource name='DKFZ/MIPS'/>
      <collection:resource name='IMSUT'/>
      <collection:resource name='KDRI'/>
      <collection:resource name='MGC/NCI'/>
      <collection:resource name='BIND'/>
      <collection:resource name='BodyMap'/>
      <collection:resource name='CCDS'/>
      <collection:resource name='dbSNP'/>
      <collection:resource name='DDBJ/EMBL/GenBank'/>
      <collection:resource name='DIP'/>
      <collection:resource name='Ensembl'/>
      <collection:resource name='EntrezGene'/>
      <collection:resource name='fRNAdb'/>
      <collection:resource name='GenAtlas'/>
      <collection:resource name='Gene ontology (GO)'/>
      <collection:resource name='GeneCards'/>
      <collection:resource name='GGDB'/>
      <collection:resource name='GTOP'/>
      <collection:resource name='HGNC'/>
      <collection:resource name='H-GOLD (GDBS)'/>
      <collection:resource name='HPRD'/>
      <collection:resource name='IntAct'/>
      <collection:resource name='InterPro'/>
      <collection:resource name='KEGG'/>
      <collection:resource name='LIFEdb'/>
      <collection:resource name='LSBM'/>
      <collection:resource name='MGI'/>
      <collection:resource name='MINT'/>
      <collection:resource name='Mutation view'/>
      <collection:resource name='NC-IUBMB (EC)'/>
      <collection:resource name='OMIM'/>
      <collection:resource name='PubMed'/>
      <collection:resource name='RefSeq'/>
      <collection:resource name='UCSC'/>
      <collection:resource name='UniGene'/>
      <collection:resource name='UniProt'/>
      <collection:taxonomy name='Human' primary='yes'/>
      <collection:operation country='Japan'>
        <collection:organization name='Biomedicinal Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST)'/>
      </collection:operation>
      <collection:legal condition='Attribution&amp;Share Alike'/>
      <collection:legal condition='User account is not required. '/>
      <collection:article>19933760 Yamasaki C, et al. H-InvDB in 2009: extended database and data mining resources for human genes and transcripts. Nucleic Acids Res. 2010 Jan;38(Database issue):D626-32 | 18089548 Yamasaki C, et al. The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts. Nucleic Acids Research 36, Database issue D793-D799, 2008 | 15103394 T. Imanishi et al. Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones.PLoS Biology 2 (6), 856-875 2004 </collection:article>
      <collection:keyword word='cDNA'/>
      <collection:keyword word='annotation'/>
      <collection:keyword word='integration'/>H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. By extensive analyses of all human transcripts, we provide curated annotations of human genes and transcripts that include gene structures, alternative splicing isoforms, protein functions, etc.</database>
  </category>
</results>
