More information XML output

Name SNP-system
Aliases None
Description

We developed SNP-system which is unified in common interface and released it on the web.

Type Tool
Main Institutes of management Biomedicinal Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the Institute Japan
URL of the site http://www.h-invitational.jp/snps/
Interface GUI
Input example

Under investigation

Keyword
Statistical genetics | SNP | haplotype | Linkage disequilibrium
Amount of the all data for download(Mbyte) | Method to obtain the all data. - | None
External resources (databases) in building the product. Under investigation
Data type DNA-sequence
Biological species in the main concern
All species
Conditions of use Under investigation
Frequency of updates (in last two years) 1
Last date of updates (date of confirmation) 2005/11/04 (2009/03/05)
Main IDs used in the products Under investigation
How to make a link to get access to each IDs. Under investigation
external databases to which this database/tool have links

Under investigation

Published papers (PubMed IDs)

Under investigation

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Project name Genome Diversity Project
Area drug discovery
Purpose This project is being undertaken to collect genetic polymorphism information relating to model diseases (such as autoimmune diseases, diabetes, eating disorders, cancer, etc.). It also aims to develop a technique to associate disease-related or drug sensitive genes with the differences in their expression, for example, why some people have a particular medical condition such as an allergy and others do not. The results will be used to develop analysis technology and create a useful database. (Ref. http://www.nedo.go.jp/kankobutsu/pamphlets/kouhou/outline2005.pdf (P. 15))1
Introduction It also aims to develop a technique to associate disease-related or drug sensitive genes with the differences in their expression, for example, why some people have a particular medical condition such as an allergy and others do not. The results will be used to develop analysis technology and create a useful database.
Keyword genome-wide association study | microsatellite | SNP | disease | polymorphism | genetic statistics
Patent (Japan, overseas) JP2004325419(A) | JP2005038279(A) | JP2005085063(A) | JP2005092719(A) | JP2005129024(A) | JP2005278479(A) | JP2005312364(A) | JP2006024063(A) | JP2006048429(A) | JP2006065529(A) | JP2006079334(A) | JP2006277611(A) | JP2007074916(A) | JP2007097486(A) | JP2007233485(A) | JP2008021028(A) | JP2004192018(A) | JP2004173505(A) | JP2004272350(A)
Archives
The report on "Genome Diversity Project" 2003-2005. Japanese.
Product (Database, Tool) Nothing