More information XML output
| Name | ARCHAIC |
|---|---|
| Aliases | ARCHAebacterial Information Collection |
| Description | The database provides DNA sequences of archaebacterial genomes and their annotation. The aim of ARCHAIC is to analyze archaebacterial genomic DNA sequences (including originally determined ones) in order to understand the overall organization of the genomes and compare different species. Original informatical methods were developed for identifying genes, pseudo-genes, and operons essentially on the basis of a statistical analysis of transcription and translation signals. Three archaes data are available (Pyrococcus sp. OT3, Thermoplasma volcanium GSS1, Archaeoglobus fulgidus). |
| Type | DB |
| Main Institutes of management | Neuroscience Research Institute (NRI), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://riodb.ibase.aist.go.jp/archaic/ARCHAIC.html |
| Interface | GUI |
| Input example | None |
| Keyword |
archaebacterial | DNA | sequences
|
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | - | None |
| External resources (databases) in building the product. | Under investigation |
| Data type | DNA-sequence , genome |
| Biological species in the main concern |
Archaea
|
| Conditions of use | Under investigation |
| Frequency of updates (in last two years) | 0 |
| Last date of updates (date of confirmation) | 2001/2/5 (2009/1/21) |
| Main IDs used in the products | Under investigation |
| How to make a link to get access to each IDs. | Under investigation |
| external databases to which this database/tool have links | Under investigation |
| Published papers (PubMed IDs) | The list is on site "http://riodb.ibase.aist.go.jp/archaic/general_info/information/related_publications.html" |