More information
| Name | GENIUS II |
|---|---|
| Aliases | None |
| Description | GENIUS II is an automated database system in which protein coding regions in complete genomes are assigned to known three-dimensional structures. |
| Type | DB |
| Main Institutes of management | Computational Biology Research Center (CBRC),National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://genius.cbrc.jp/ |
| Interface | GUI |
| Input example | input the keyword or sequence in the text box and select kingdom, and then push the "Send" button. |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0 | Under investigation |
| External resources (databases) in building the product. | Under investigation |
| Data type | Ptotein-sequence amino acid sequence |
| Biological species in the main concern | All species |
| Conditions of use | Under investigation |
| Frequency of updates (in last two years) | 1 |
| Last date of updates (date of confirmation) | 2005/07/11 (2008/12/16) |
| Main IDs used in the products | Gene name |
| How to make a link to get access to each IDs. | Under investigation |
| external databases to which this database/tool have links | Under investigation |
| Published papers (PubMed IDs) | Asaf A.Salamov, Makiko Suwa, Christine A.Orengo and Mark B.Swindells, Combining sensitive database searches with multiple intermediates to detect distant homologues, Protein Engineering vol.12 no.2 pp.95-100, 1999 | ASAF A. SALAMOV, MAKIKO SUWA, CHRISTINE A. ORENGO and MARK B. SWINDELLS, Genome analysis: Assigning protein coding regions to three-domentional structures, Protein Science (1999), 8 :771-777. | Suwa, M., Salamov AA, Nishikawa, T. and Swindells, M. B. GoodMotif: The system for finding high quality motifs that can discriminate an unique family. Genome Informatics Series No8. 1997 8 : 342-343. | Yabuki, Y., Mukai, Y., Swindells, M. B. and Suwa M. | GENIUS II: a high-throughput database system for linking ORFs in complete genomes to known three-dimensional structures, Bioinformatics (2004), 20 :596-598. |