More information XML output
| Name | GRIFFIN |
|---|---|
| Aliases | G-protein Receptor Interacting Feature Finding INstrument |
| Description | It is a high-throughput system to predict GPCR - G-protein coupling selectively with the input of GPCR sequence and ligand molecular weight. This system consists of two parts:1) HMM section using family specific multiple alignment of GPCRs, 2)SVM section using physico-chemical feature vectors in GPCR sequence. |
| Type | Tool |
| Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://griffin.cbrc.jp/ |
| Interface | GUI |
| Input example | Enter potential GPCR sequence in the text box, and push "Predict" button. |
| Keyword |
G-protein coupling receptor|prediction
|
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | - | None |
| External resources (databases) in building the product. | None |
| Data type | Ptotein-sequence , amino acid sequence |
| Biological species in the main concern |
All species
|
| Conditions of use | None |
| Frequency of updates (in last two years) | 3 |
| Last date of updates (date of confirmation) | 2005/08/03 (2009/09/28) |
| Main IDs used in the products | None |
| How to make a link to get access to each IDs. | None |
| external databases to which this database/tool have links | None |
| Published papers (PubMed IDs) | Yabuki Y, Muramatsu T, Hirokawa T, Mukai H and Suwa M (2005). Nucleic Acids Res , 33 , W148-153. |