More information XML output
| Name | H-Exp |
|---|---|
| Aliases | Integration of Tissue-specific expression profile database (iAFLP-DB) |
| Description | This is a DB of Human Tissue-specific expression profile data and it was integrated and coordinated with H-InvDB. This system enables (1) fast search, sort, and view for gene cluster or isoform, (2) comparison of expression pattern for gene cluster or isoform, (3) display of detailed information for gene expression and related data. |
| Type | DB |
| Main Institutes of management | Biomedicinal Information Research Center (BIRC), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://hinv.jp/H-ExP/ |
| Interface | GUI |
| Input example | Enter HIX ID, Key Word or Acc No. to text box, and push [Search] button. You can search gene list by using HIX, Entrez gene, UniGene or OMIM IDs. |
| Keyword |
Under investigation
|
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | - | None |
| External resources (databases) in building the product. | NCBI |
| Data type | Gene expression |
| Biological species in the main concern |
Human
|
| Conditions of use | Attribution&Share Alike |
| Frequency of updates (in last two years) | 1 |
| Last date of updates (date of confirmation) | 2008/03/31 (2008/10/21) |
| Main IDs used in the products | HIX(gene cluster) | Accession Number | NCBI Gene ID | UniGene ID | OMIM ID |
| How to make a link to get access to each IDs. | http://hinv.jp/H-ExP/EXPDB0102.cgi?cmd=GEN&tid=[HIXID] |
| external databases to which this database/tool have links | |
| Published papers (PubMed IDs) | Under investigation |
| Project name | The project of integrating protein functional analysis-related database and achievement |
|---|---|
| Area | Genome Informatics |
| Purpose | The basal construction of biological information and the spread of the outcome of "Functional Analysis of Protein and Research Application project (H12-17)" and "Genome Diversity Project (H12-17)". |
| Introduction | The purpose are the basal construction of biological information and the spread of the outcome of "Functional Analysis of Protein and Research Application project (H12-17)" and "Genome Diversity Project (H12-17)". Three database were integrated; (1) iAFLP-DB, (2) SV-DB and (3) H-GOLD. |
| Keyword | human | expression profile |
| Patent (Japan, overseas) | Under investigation |
| Product (Database, Tool) | Nothing |
| Project name | Genome Information Integration Project (GIIP) |
|---|---|
| Area | Genome Informatics |
| Purpose | # construction of "all human gene catalogue" # development of annotation technique based on H-InvDB # data integration of disease, gene expression and PPI information |
| Introduction | GIIP project was a model project of METI, which executed for 3 years since 2005 to 2007. The representative institute of the commission was Japan Biological Informatics Consortium (JBIC) and also the other six research institutes took their parts. The aim of the project is to construct an annotated human gene database of the world highest quality, based on H-Invitational Database (H-InvDB). |
| Keyword | genome | gene | annotation | integrated | database |
| Patent (Japan, overseas) | JP2006323830(A) | JP2008097189(A) |
| Archives | |
| Product (Database, Tool) | Nothing |
