More information XML output

Name SpiceHIT
Aliases None
Description

This program is a JAVA program to detect metabolite peaks in CE-MS experimental data measured by SIM mode. It can use CSV text file as an input file. Peak list is calculated by parameters of peak width, peak intensity, etc with smoothing function. Metabolite name of targeted peaks is automatically characterized using definition file. In addition, user can edit the annotation of these and another unknown peaks by this program. The result can output as Excel format file that contains multiple sheets for each m/z value. This program can collect and summarize peak information, both of known and unknown metabolite, in a same manner. It can produce large-scale dataset for metabolome analysis..
Type Tool
Main Institutes of management Kazusa DNA Research Institute.
Country of the Institute Japan
URL of the site http://www.kazusa.or.jp/komics/software/SpiceHit/
Interface GUItool
Input example

After loading method file (definition file of SIM mode) and raw data, the result is shown by cricking Analyze button. The results can save from File menu.
Keyword
selected ion monitoring method|peak identification tool|capillary electrophoresis|mass spectrometory
Amount of the all data for download（Mbyte） | Method to obtain the all data. 6.13 | Download SpiceHit_2_0.zip from the page http://www.kazusa.or.jp/komics/software/SpiceHit/
External resources (databases) in building the product. Under investigation
Data type Metabolite repression
Biological species in the main concern
All species
Conditions of use Attribution & Creative Commons
Frequency of updates (in last two years) 0-1 times / year
Last date of updates (date of confirmation) 2011 (2011/11/10)
Main IDs used in the products N/A
How to make a link to get access to each IDs. None
external databases to which this database/tool have links

N/A
Published papers (PubMed IDs)

12855464 | 16204111