More information
| Name | Reference database for gene Expression Analysis |
|---|---|
| Aliases | RefExA |
| Description | RefExA is a exhaustive gene expression database for human normal tissue, normal cell and cancer cell. |
| Type | DB |
| Main Institutes of management | Epigenome & Signaling Cluster University of Tokyo (ESCUT) |
| Country of the Institute | Japan |
| URL of the site | http://sbmdb.genome.rcast.u-tokyo.ac.jp/refexa/main_search.jsp |
| Interface | GUI |
| Input example | You can choose 2 search types (Quick, Advanced). Search term is Genbank accession, UniGene cluster ID, Gene symbol, Gene name etc. Input term and click "Search" button. |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0 | If you are interested in entire dataset, please contact us via dbadmin@genome.rcast.u-tokyo.ac.jp. |
| External resources (databases) in building the product. | UniGene | NetAffx |
| Data type | Disease-cancer gene expression |
| Biological species in the main concern | Human |
| Conditions of use | None |
| Frequency of updates (in last two years) | No update for more than 2 years |
| Last date of updates (date of confirmation) | 2006 (2010/01/25) |
| Main IDs used in the products | GenBank Accession ID | Probe Set ID |
| How to make a link to get access to each IDs. | http://157.82.78.238/refexa/graph_viewer.jsp?probe=[chip set ID]]&chip=[chip name]&value=Raw&standardize=OFF&upper=[Color Range  upper]&lower=[Color Range  lower]&sigma=[sigma value] |
| external databases to which this database/tool have links | N/A |
| Published papers (PubMed IDs) | Under investigation |